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In the Deku King's Chamber after learning Sonata of Awakening the player technically gets caught and thrown out of Deku Palace.
Since this, in general, is unavoidable it is excluded and will not count as a hit.
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The void near the Lone Peak Shrine (a.k.a. Lens of Truth Cave) is the same as Deku Drowning.
If the settings are not set to include Deku Drowning then this void will not add hits to the count.
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When getting lit on fire the game will usually slowly start taking health from the player in small increments.
Each time it takes away health will count as a hit.
This means being lit on fire can, and most likely will, add multiple hits.